BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D06LP1|AL430532
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1659 201 2e-51
>3x_Contig1659
Length = 17570
Score = 201 bits (97), Expect = 2e-51
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 1 gattcttgtcacaacatgcatggmgatctaaaattctcaccgaaagmmgtmccatgtctt 60
||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||
Sbjct: 6078 gattcttgtcacaacatgcatggagatctaaaattctcaccgaaagaagtaccatgtctt 6019
Query: 61 ctcctgaagacattaacaccgaacgtgttaatttgaanaacantattntcaccna-ttan 119
||||||||||||||||||||||||||||||||||||| |||| |||| | || | |||
Sbjct: 6018 ctcctgaagacattaacaccgaacgtgttaatttgaagaacagtattgtgacgaagttag 5959
Query: 120 ttnccaatcaananatanacnatntctccattac 153
|| |||||||| | ||| || || ||||||||||
Sbjct: 5958 ttgccaatcaagagatagacgatgtctccattac 5925
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1486
Number of Sequences: 1807
Number of extensions: 1486
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (99.9 bits)